read .bed file

read .bed file

read_bed(file, ...)

Arguments

file	string. path to input file, passed onto readr::read_tsv()
...	passed on to readr::read_tsv()

Value

a tibble of 6 variables

Examples

sample_bed <- paste(
    'chr22\t1000\t5000\tcloneA\t960\t+',
    'chr22\t2000\t6000\tcloneB\t900\t-',
    sep = '\n'
)
read_bed(sample_bed)
#> # A tibble: 2 x 6
#>   chrom start   end name   score strand
#>   <chr> <int> <int> <chr>  <int> <chr> 
#> 1 chr22  1000  5000 cloneA   960 +     
#> 2 chr22  2000  6000 cloneB   900 -